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Supplementary Table 3
Supplementary Table 3: Differential abundance of species across CSTs.
model = LMCLR
Supplementary Table 4
Supplementary Table 4: Differential abundance of Antibiotic Resistance Genes (ARGs) across CSTs.
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model = CPLM
Supplementary Table 5
Supplementary Table 5: Differential abundance of Mobile Genetic Elements (MGEs) across CSTs.
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model = CPLM